YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YJR012C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVQSSPILR QSSFNFITFY LACQLLTFLC IYIVFFFVKF LPTIKVSFII IGACKRAPHV  60
   61 SVYLLKIDCE HNESSMAAGG ELSYEELLDH ILNNKPIPNI VEVPNVTLDE GLASTPSLRP 120
  121 RPRPWEGQLQ HQSHQGSLDK PNISLDIDQE SLEGMTSLTR LSECYDIQSK LQINDSDNDN 180
  181 DDNNNDNNKG DGNDDDNNTV TANPTAR

Type	Start	End	Confidence
Cytoplasmic	1	15	0.67
Transmembrane Helix	16	38	0.92
Non-Cytoplasmic	39	207	0.68