YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ELO1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSDWKNFCL EKASRFRPTI DRPFFNIYLW DYFNRAVGWA TAGRFQPKDF EFTVGKQPLS  60
   61 EPRPVLLFIA MYYVVIFGGR SLVKSCKPLK LRFISQVHNL MLTSVSFLWL ILMVEQMLPI 120
  121 VYRHGLYFAV CNVESWTQPM ETLYYLNYMT KFVEFADTVL MVLKHRKLTF LHTYHHGATA 180
  181 LLCYNQLVGY TAVTWVPVTL NLAVHVLMYW YYFLSASGIR VWWKAWVTRL QIVQFMLDLI 240
  241 VVYYVLYQKI VAAYFKNACT PQCEDCLGSM TAIAAGAAIL TSYLFLFISF YIEVYKRGSA 300
  301 SGKKKINKNN

Type	Start	End	Confidence
Non-Cytoplasmic	1	63	0.57
Transmembrane Helix	64	83	0.76
Cytoplasmic	84	96	0.79
Transmembrane Helix	97	118	0.83
Non-Cytoplasmic	119	191	0.79
Transmembrane Helix	192	214	0.83
Cytoplasmic	215	225	0.78
Transmembrane Helix	226	247	0.84
Non-Cytoplasmic	248	271	0.86
Transmembrane Helix	272	295	0.87
Cytoplasmic	296	310	0.97