YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATG27
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCGLTDVIL PGKDAITTQI IDFDKNIGFN VEETESALTL TLKGATWGAN SFDAKLEFQC  60
   61 NDNMKQDELT SHTWADKSIQ LTLKGPSGCL KSKDDDKKNG DGDNGKDGDS EGKKPAKKAG 120
  121 GTSWFTWLFL YALLFTLIYL MVVSFLNTRG GSFQDFRAEF IQRSTQFLTS LPEFCKEVVS 180
  181 RILGRSTAQR GGYSAV

Type	Start	End	Confidence
Cytoplasmic	1	123	0.96
Transmembrane Helix	124	146	0.90
Non-Cytoplasmic	147	196	0.95