YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ASG7
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKYCCQCKS CKMSVPVQPW LPRFFVFGIL CPVFWLVNLL AWWFLQYWQP HELEFHDLQE  60
   61 DEYPGFYEYE AITKRTVIPI KEEVLQEIRV MQNFSDSNSE EYYESKDGMP SSFLNVNTEQ 120
  121 VEDENDTLKK YRYAFLKKVA HDVLESHDLL RKTFRDWNLR SLLGLLIDSI LIIFVVLLCK 180
  181 KSR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.84
Transmembrane Helix	21	45	0.89
Non-Cytoplasmic	46	158	0.86
Transmembrane Helix	159	179	0.88
Cytoplasmic	180	183	0.74