YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FMP33
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYTRLLRHN SQFTKFSGTS PNLGSKPLFS KGNLYTSLLV TTLYGTGLAC LYLESNSLNK  60
   61 SKEQEDPHAI AEDDIVNIVH DAPNRIFKPA LDTYQEKELD LQKSDLHKVL HSLTYSDVSQ 120
  121 FSIVWGFLIQ LSSLIGNSTL GKKSILYKGS VVSVLGFPPL IYMALKLRMK QLEKAGVRFE 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	117	0.63
Transmembrane Helix	118	136	0.65
Non-Cytoplasmic	137	144	0.70
Transmembrane Helix	145	165	0.76
Cytoplasmic	166	180	0.71