YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SNA3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRDHINDHD HRMSYSINKD DLLLMVLAVF IPPVAVWKRK GMFNRDTLLN LLLFLLLFFP  60
   61 AIIHACYVVY ETSSERSYDL SRRHATAPAV DRDLEAHPAE ESQAQPPAYD EDDEAGADVP 120
  121 LMDNKQQLSS GRT

Type	Start	End	Confidence
Cytoplasmic	1	46	0.50
Transmembrane Helix	47	68	0.92
Non-Cytoplasmic	69	133	0.63