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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113195568, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPVPVILTV ILAVIQPCRT EPRKPNELLV ITAATEVTDG YLRFMRTIRQ FNYTIQVLGL  60
   61 GEQWRGGDVA RTVGGGQKVR WLKTELEKHK DKQNTVIMFV DSYDVILASG PVELLRKFSR 120
  121 FSHRVVFSAE GFCWPDQRLA SKYPAVHHGK RYLNSGGFIG FAPEIHAIVQ QWKYKDDDDD 180
  181 QLFYTRIYLD KEKRRKFNMT LDHRSQIFQN LNGAIEEVVL KFEKSRVRVR NVAYDTLPVV 240
  241 IHGNGPTKLQ LNYLGNYVPT AWTYENGCGI CEEDLLDLSH LSDEEMPLVH VAVFIEQPMP 300
  301 FLEEFLERLA TLNYPHTRIR LFLHNNVVYH EQHVERFWTR HRSLFTGARI VGPEENLKHD 360
  361 QARTMAVEAC KKDVSCDYFF SLDADVALTN PDVLRILIEE NKSVIAPMLS RHGKLWSNFW 420
  421 GALSPEGFYS RAEDYIDIVQ SKRVGLWNVP YITQVYLIRG ETLRSRLAAV SLYQQEGMDP 480
  481 DMSFCKSVRE QGIFMFVSNR DEFGRLVSSA NYNISRLHPD MWQIFDNPVD WREKYIHENY 540
  541 SRIFEDDESV VEQPCPDVYW FPAFSERMCD DLVETMEEFG QWSGGGHKDE RLSGGYENVP 600
  601 TVDIHMNQIQ FEKEWLKFLK EYIVPVTEKL YPGYYPKAQA VMNFVVRYRP DEQPSLRPHH 660
  661 DSSTFTINIA LNSKGVDYEG GGCRFLRYNC KVESPRKGWS FMHPGRLTHY HEGLPTTQGT 720
  721 RYIMVSFVDP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle