YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ICS3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHISLPTRNK SYFRIRTRTY QIGLYHSDSS PIRDISVLHL LIATLCTIFF PIFFSLSKVQ  60
   61 VVQWQGTTIS KNCIALTMSF PLNAIPGMYL IIAFPRLQTV IPLQRNTPVR ITKSVIVKGA 120
  121 VSVPRISSPM H

Type	Start	End	Confidence
Cytoplasmic	1	34	0.69
Transmembrane Helix	35	56	0.90
Non-Cytoplasmic	57	72	0.61
Transmembrane Helix	73	95	0.80
Cytoplasmic	96	131	0.61