YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|112984110, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLSLTQPSS WILLLLVTNL FLWKNVASVP FCAMRNVRCF MFLEDMFDLA GSMSHNISIE  60
   61 VSEMFTEFEK HYAKVPGLKD KSLTRCHTTS LPIPENKEQA KHTHYGALLK SAHMVLKAWK 120
  121 SPLNDLVRQI STLKNIPDTI ISKATDIKLK INSVEQGVNS IINRMLQNGD EERNYPAWSS 180
  181 LPIFKSNDED ASIRSFYGMI SCLDNDCKKV DIYLNVLKCY VLQMDNC

Type	Start	End	Confidence
Signal Peptide	1	28	0.86
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	227	0.96