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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76162840
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLSLCNSSN LNTSRKPLMA LPHSISALAT TLTLSSPTTK PQKVNPFPFF SNQKTRFLTK  60
   61 QTRPRSRRSL SLTPARVAAP PSTVEADQSY PETENNETEE EFNDESSYSK FTWRDHWYPV 120
  121 SLIEDLNPLL PTPFQLLGRE IVLWYDKSIS QWVAFDDKCP HRLAPLSEGR IDEDGKLQCS 180
  181 YHGWSFDGCG SCVKIPQAAS EGPEARAIGS PKACATRFPT MVSQGLLFVW PDENGWEKAK 240
  241 ASKPPMLPDD FDKPEFATVN IQRDLFYGYD TLMENVSDPS HIEFAHHKVT GRRDRAKPLP 300
  301 FKMDSRGSWG FSGANEGNPQ ISAKFVAPCY MMNKIQIDTK LPVVGDQKWV VWICSFNVPM 360
  361 APGKTRSIVC SARNFFQFSV PGPAWWQVVP RWYEHWTSNK VYDGDMIVLQ GQEKIFLSET 420
  421 KEGGDINKQY TNITFTPTQA DRFVLAFRNW LRRHGNGQPE WFGNSSDQPL PSTVLSKRQM 480
  481 LDRFEQHTLK CSSCKAAYEG FQTWQKVLIG TTVVFCATSG IPSDVQLRVL LAGLAIVSAA 540
  541 ITFALNQLQK NFEFVDYVHA EID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle