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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: clumsy-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSLFLTHFL LIALPVLADI DRSQFMVGSI FTSDKDESEI AFRTAVDRAN ILERNVELVP  60
   61 IVVYANTDDS FIMEKMVCNL ISQGVIAIFG PSTGSSSDII ASICDTLDIP HIVYDWIPNE 120
  121 SIPDREHSTM TLNVHPDNLL LSQGLAEIVQ SFAWRSFTVV YETDKELQQL QDILQVGEPI 180
  181 SNPTTVKQLG PGDDHRPFLK EIKLSTDNCL ILHCAPDNLL KILQQANELK MLGEYQSVFI 240
  241 PLLDTHSIDF GELSGVEANI TTVRLMDPSD FHVKNVVHDW EEREKREGRY FKVDPNRVKS 300
  301 QMILLNDAVW LFSKGLTELG IFEELTAPDL ECRRKKPWPF GKRIIEFIKA RSEETSTGRI 360
  361 DFNENGQRSF FTLRFMELNS DGFLDLATWD PVNGLDVLND DEESEKRVGQ KLSNKTFIVS 420
  421 SRLGAPFLTL REPQEGEILT GNSRYEGYSI DLINEIAKML NFKFEFRMSP DGKYGALNKV 480
  481 TQTWDGIVRQ LIDGNADLGI CDLTMTSSRR QAVDFTPPFM TLGISILFSK PPTPPTDLFS 540
  541 FLSPFSLDVW IYMGSAYLFI SLLLFALARM APDDWENPHP CKEPEEVENI WSIMNTTWLS 600
  601 IGSLMGQGCD ILPKAASTRL VTGMWWFFAL MMLNSYTANL AAFLTNSRQA NSINSAEDLA 660
  661 AQSKIKYGAM AGGSTMGFFR DSNFSTYQKM WTAMESASPS VFTKTNDEGV ERVQKGKNLY 720
  721 AFLMESTTLE YNVERKCDLV QIGGWLDYKS YGIAMPFNSP YRKQISAAVL KLGELGQLAE 780
  781 LKRKWWKEMH GGGNCEKSDE DGGDTPELGL ENVGGVFLVL GLGLLSAMVL GCTEFLWNVK 840
  841 SVAIEEKISL KEAFKSEALF AARIWITTKP VHTSSESGSS NSSSSSSSRS KHSFKSQGLS 900
  901 MKSLKSSGYQ DVEASVHSKL KKIGSMFSLK SQKTVTPPPE IGWKLDKSTQ IDVVPTSDVD 960
  961 QELIPEVEPH LPHRHHHHHH HRHHHHHHQP DQEHDRNPSP PE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle