YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0304532, FBp...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLQSLSLHA DKLSGNSPAA AAATGAAAAT SEATAVASAA AATTMLATAP VAHVANGNNS  60
   61 NSSAGSSSNS NSSSNNHSLY SNNNLNTGNN SQQQQQQQQQ HPQILPVKYE YLENLTSSGA 120
  121 TSGAIAATTT FTGAAKSFHP YLRPTGSGSN SNNSIAALST TTAATAAKMS TTLFETLLHN 180
  181 QINSSPIALP AATAIAAISA AATAATATPG TAATAAAAAA AAPSTQLNSS INSRTSLGDQ 240
  241 GGAIVVVTPA PPVAAPPTGG PNRNQSPTRD CSVKMELMES TSPDSIKDQP DADNIKMFVG 300
  301 QIPKTWDETR LRQMFEQFGP VHTLNVLRDK VTSISRGCCF VTYYTRKAAL RAQDALHNIK 360
  361 TLDGMHHPIQ MKPADSENRN ERKLFVGMLN KKYTEADVRQ LFTGHGTIEE CTVLRDQAGQ 420
  421 SKGCAFVTFA TKQNAIGAIK ALHQSQTMEG CSAPLVVKFA DTQKEKDQKK MQQIHAFCGI 480
  481 NTPSGATAGA ATPTINAATA LIAAPPSAGR TNPSMAAALA AVPQVQQAGS AATAPTTLVP 540
  541 LNSTTALSAS LTPNLLATNA AHQGAAAAAA YLGADPAAAA HLQLYQQLHG YGLSPAHYLP 600
  601 GLNFHHPPEN SAHHSQHSPG IGGASAASLS AAAATAASNP LGGAPPPTPT PTSSAGHAAG 660
  661 AGLLAAPSMS MQNLVALLAT PTAHHQLSLH HSSSSSGHNN GNSSATSGLH NQRLTYAAAP 720
  721 PPPPISTTYN MPQLIGHTAT PTQPGGSSQS LTFNALWPPN AADPYSSSLS GLTNGAAYGA 780
  781 ASQPVTTSAL QAAAAGVTGK QIEGPDGSNL FIYHLPQEFI DTDLASTFLP FGNVLSAKVF 840
  841 IDKQTNLSKC FGFVSYDNPH SANAAIQAMH GFQIGSKRLK VQLKRSKDAA KPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle