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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ddr-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAIKLQESN SIYSRSECSP TIGVPALVES QGGEGHESRR PATNYLKSYC RIKRHGVNNS  60
   61 KTLCWLTLTL ILLANRFGMG TAVGTPETPA AVGSNGLLAE MPIGTCKQAL GMESGAIADF 120
  121 QITASSAHDM GNVGPQHARA ANNNNGGAWC PKHMVSRGLT EYLQVDLLGV HLVSAIRTQG 180
  181 RFGKGQGQEY TEAYVIEYWR PGLKKWIRWR SLQGKEVLPG NINTYSEVEN VLQPSVFASK 240
  241 VRLYPYSQYD RTVCLRAEIV GCAWEEGIVS YSIPKGMQRG MDIDLSDKTY DGYEEGDHYV 300
  301 NGLGQLVDGQ RGKDNFRADI NGLGKGYEWI GWRNDTLLGR PVEIIFEFET VRNLSAVIIH 360
  361 TNNMFSKDVQ VFVHAKVFFS IGGRHFSGEP VQFSYMPDLV LDHARDVTIK LHHRLGRYVQ 420
  421 LHLYFAARWM MISEITFISA PVVGNFTDEL ANGEKQSVTS EYPLQRDEVG RAISSGGERS 480
  481 QHTTQVISPK PIDHQEPETS FVGVIITVLG TIIMLLVAFI LLIVARNKHV RSRENGLDAF 540
  541 QHNFSPDTLN GNGVLKVVTT MDDNESSIDK NSLYHEPFNA NMYTSAASAC PMNDLQRQHV 600
  601 SPDYTDVPDI VCQDYAVPHM QQLLPNAPPC GSGCGTGTGT GPGRGSSPEF VVATGKVTAS 660
  661 ARNSLNAATL PLPSPPVPPP LEKYYAATPV SSKPMPVAPP GSQSSGSLSS STTAATTPTS 720
  721 GVVGVGKPHH YNLDMSANFA DINEERANCQ VQEFPRQSLV IVEKLGSGVF GELHLCETNV 780
  781 LNDLTEFDSH CSATLVAVAT LRPGANDHLR KEFRSKAKQL AQLSDPNVAR LVGACLRDEP 840
  841 ICIVQDYSHC LGDLNQFLQE HVAETSGLMA KKSLSFGCLV YIATQIASGM KHLEQMNFVH 900
  901 RDLATRSCII GPELCVKVCS IGTVINRSAY ASDYCQLEGF TGRQSQPMPI RWMAWESVLL 960
  961 GKFTTKSDVW SFAVALWEIL TFAREQPYEH LSDKSVIENI GLIYRDYKMH ELLPMPPNCP1020
 1021 REIYDLMCEC WQRDESSRPS FREIHLYLQR KNLGFKPQTH THMY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle