YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151945072
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSIRRYLRV PNELKPSQIF KQDSLSPSKI GLQIVLLQIF YYTTAIVLFY CWAKLAGYDL  60
   61 NIKEWLFSWE NIDFTNAYGL SISLLWLLDS LICVFFLTVI VGRSKLAWDF AITIHAINFI 120
  121 VVFLYTRKFP SFSWFFLQIL SSLILIFLGT WTTRWRELRD TFFEGLVDPN EGEVGLVTPS 180
  181 QQHSNHSELE QSPIQLKDLE SQI

Type	Start	End	Confidence
Cytoplasmic	1	33	0.95
Transmembrane Helix	34	56	0.86
Non-Cytoplasmic	57	76	0.92
Transmembrane Helix	77	99	0.92
Cytoplasmic	100	105	0.84
Transmembrane Helix	106	126	0.92
Non-Cytoplasmic	127	133	0.78
Transmembrane Helix	134	153	0.95
Cytoplasmic	154	203	0.97