YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIR016W
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTRCLLGV GLPVDVTATE TLTHDEQGPG VEPGPCSRGS SIDGLLPSLL GPHDDVDDDS  60
   61 AAFHKYMTLS RDGAGAIHAP SLVEDASRND DDDDDEDDDD SSMSRDLSKA LDMSSSSSSS 120
  121 PRVQSRRHRS SVSAISAILH QGKSGREDIT GSLSVPAEQE KLSFLAKASS IFFRRNSMPR 180
  181 DKHTHSVCPA SRPDSERFIV TSAAAQSLRR QQQLEDAQYA RVITNFRTIG WCSPSEIESV 240
  241 EYKRSLINAE WDEKISLLSH AQCYK

Type	Start	End	Confidence
Signal Peptide	1	18	0.78
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	265	0.99