YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIR014W
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLQGKKGK GYFNDEGLDD KLIQKGKGAG HRKEMLHLED DNGRQRSVIA NLQKFVYCCL  60
   61 YLRFIKDGSL FLILLGWIIS SLCDFIQELT LRYLKKNYLE VGRDNDQEDD ESLAIRGLET 120
  121 PIVRMIINKA IRYYQGLILL ETAYCIVYHI RLDVSRDICS KPYGFVIMLL IREFTCPVPT 180
  181 AFPSKLLLVL LDILLLFCQI VIINGSLSSS LQNVKLIVKE LNAEEEGALN ILKLNTWHMD 240
  241 ATGPELIVLK NHDKSIPQQA DGDDATEITP LLNIAE

Type	Start	End	Confidence
Cytoplasmic	1	69	0.61
Transmembrane Helix	70	86	0.36
Non-Cytoplasmic	87	276	0.54