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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|112363659
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAMKQEQQP TPGARATQSQ PADQELGSNS PPQRNWKGIA IALLVILVVC SLITMSVILL  60
   61 TPDELTNSSE TRLSLEELLG KGFGLHNPEA RWINDTDVVY KTDNGHVMKL NAETNATTLL 120
  121 LDNSTFVTFK ASRHSLSPDL KYVLLAYDVK QIFHYSFTAS YLIYNIHTGE VWELNPPEVE 180
  181 DSVLQYAAWG VQGQQLIYIF ENNIYYQPDI KSSSLRLTSS GKEGIVFNGI ADWLYEEELL 240
  241 HSHIAHWWSP DGERLAFLMI NDSLVPNMVI PRFTGALYPK AKQYPYPKAG QANPSVKLYV 300
  301 VNLYGPTHTL ELMPPDIFKS REYYITMVKW VSNTRTVVRW LNRPQNISIL TVCESTTGAC 360
  361 SRKYEMTSDT WISKQNEEPV FSRDGSKFFM TVPVKQGGRG EFHHIAMFLV QSKSEQITVR 420
  421 HLTSGNWEVI RILAYDETTQ KIYFLSTEFS PRGRQLYSAS TEGLLSRDCI SCNFRKEDCT 480
  481 YFDASFSPMN QHFLLFCEGP KVPMVSLHST DNPSNYYILE RNSMMKETIQ KKKLAKREIR 540
  541 ILHIDDYELP LQLSFPKDFL EKNQYALLLI IDEEPGGQMV TEKFHVDWDS VLIDTDNVIV 600
  601 ARFDGRGSGF QGLKVLQEIH RRTGSVEAKD QIAAIKYLLK QPYIDSKRLS IFGKGYGGYI 660
  661 ASMILKSDEK FFKCGTVVAP ISDMKLYASA FSERYLGMPS KEESTYQASS VLHNIHGLKE 720
  721 ENLLIIHGTA DTKVHFQHSA ELIKHLIKAG VNYTLQVYPD EGYHISDKSK HHFYSTILRF 780
  781 FSDCLKEEVS VLPQEPEEDE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle