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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|112363655
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAMKQEPQP TPGARASQAQ PADQELGSNS PPQRNWKGIA IALLVILVVC SLITMSVILL  60
   61 TPDELTNSSE TRLSLEDLFR KDFVLHDPEA RWINDTDVVY KSENGHVIKL NIETNATTLL 120
  121 LENTTFVTFK ASRHSVSPDL KYVLLAYDVK QIFHYSYTAS YVIYNIHTRE VWELNPPEVE 180
  181 DSVLQYAAWG VQGQQLIYIF ENNIYYQPDI KSSSLRLTSS GKEEIIFNGI ADWLYEEELL 240
  241 HSHIAHWWSP DGERLAFLMI NDSLVPTMVI PRFTGALYPK GKQYPYPKAG QVNPTIKLYV 300
  301 VNLYGPTHTL ELMPPDSFKS REYYITMVKW VSNTKTVVRW LNRAQNISIL TVCETTTGAC 360
  361 SKKYEMTSDT WLSQQNEEPV FSRDGSKFFM TVPVKQGGRG EFHHIAMFLI QSKSEQITVR 420
  421 HLTSGNWEVI KILAYDETTQ KIYFLSTESS PRGRQLYSAS TEGLLNRQCI SCNFMKEQCT 480
  481 YFDASFSPMN QHFLLFCEGP RVPVVSLHST DNPAKYFILE SNSMLKEAIL KKKIGKPEIK 540
  541 ILHIDDYELP LQLSLPKDFM DRNQYALLLI MDEEPGGQLV TDKFHIDWDS VLIDMDNVIV 600
  601 ARFDGRGSGF QGLKILQEIH RRLGSVEVKD QITAVKFLLK LPYIDSKRLS IFGKGYGGYI 660
  661 ASMILKSDEK LFKCGSVVAP ITDLKLYASA FSERYLGMPS KEESTYQAAS VLHNVHGLKE 720
  721 ENILIIHGTA DTKVHFQHSA ELIKHLIKAG VNYTMQVYPD EGHNVSEKSK YHLYSTILKF 780
  781 FSDCLKEEIS VLPQEPEEDE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle