YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIM20
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVSVAVGT AVGIPIAVGV IIALIFWCKL QRRYKKEEIR DADLEKMVME EVAVSVYDGF  60
   61 KAEINSSSEA STINEKEANQ DLKPCQEKTA KAGYTPAYRR QLNASMGTLR PKKQSTAYTN 120
  121 VPVIFSGEKV NYGMVRDPSY SFMYPLTLSR KETSSLRSAS TSNLSSSTEN TALHEEIKLD 180
  181 DPYENDFTNY TVNKREFIDS LRPH

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.89
Transmembrane Helix	7	28	0.94
Cytoplasmic	29	204	0.96