YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COA1
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLRLVTKGL PKVTPSAAKA VLVRGSLLHS FSTSARFNNS VAEDEAKIVL KDKNRPLRID  60
   61 RELPDPTTER RKRIAGFLLF SVAIGSALSL IFNYEKTESP IISNTLYYIR RSPATKNILG 120
  121 ESIEFDGIIP WVYGELNSVK GRINITFYIK GDKNVTGTVR LVADRNTHDE EFLIHEWSVT 180
  181 AAGQKIDLLA ENTKTPI

Type	Start	End	Confidence
Cytoplasmic	1	73	0.79
Transmembrane Helix	74	94	0.76
Non-Cytoplasmic	95	197	0.97