YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|112774536
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRHDPHWMG GWLDHAPRKN SEPHPGATLM NSHDMSILSL VLQASWVVQL VMLILVGASV  60
   61 ASWATIFRKS QTLKRVRSLN DGFEQDFWSG TSLNDLYASA AHHAKQGGPM ERIFASGMRE 120
  121 YQKLRERRIA DVNQLMDGTR RAMRASFQRE MDEVESGLSF LGTVGSVSPY VGLFGTVWGV 180
  181 MHAFTGFANM EQITLATVAP GIAEALVATA MGLFAAIPAV TAYNRYAHQI DRVASQQETF 240
  241 IEEFSNILQR NVGATGSSTP SGH

Type	Start	End	Confidence
Non-Cytoplasmic	1	44	0.90
Transmembrane Helix	45	67	0.93
Cytoplasmic	68	157	0.98
Transmembrane Helix	158	180	0.86
Non-Cytoplasmic	181	200	0.76
Transmembrane Helix	201	222	0.86
Cytoplasmic	223	263	0.96