YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX5B
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTSLTKGA RLTGTRFVQT KALSKATLTD LPERWENMPN LEQKEIADNL TERQKLPWKT  60
   61 LNNEEIKAAW YISYGEWGPR RPVHGKGDVA FITKGVFLGL GISFGLFGLV RLLANPETPK 120
  121 TMNREWQLKS DEYLKSKNAN PWGGYSQVQS K

Type	Start	End	Confidence
Cytoplasmic	1	89	0.79
Transmembrane Helix	90	113	0.81
Non-Cytoplasmic	114	151	0.86