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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|112949653, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQFNTVKKQ APKAVLILSS LLISTPWLSH AQLANTQEHT ATEAAANSAT APKNNLLNQV  60
   61 KTYTCPMHPE VISHELGRCP KCNMFLVEKL DASNPAAEHA QHQAADHQTS EHGHTSAAKA 120
  121 ASQVFDTPTP KADSLVKAQN NETTIKYVCP MHTHIISDVP GTCPICGMNL EKVETGGNTQ 180
  181 EININVSGSM QQALALKVAK VERDTLWKFV ETVGQIDYDE SQITHIHARV TGWIEKLMLK 240
  241 SVGDTVKKDQ LIYEIYSPDL INAQDDYLLA MDTAKANGQG RYKDLVRNAG LRLSFLGFND 300
  301 RQIKQLAESH QTQYRVPFYA KEDGIVKALD IRDGMYIQPS TEVMSVVDLS KVWVIADVFE 360
  361 NEQSWIAKGQ KAEIAVPAMN ISGIEGTIDY IYPELDPVTR SLRVRVVLNN TEVDLRPKTL 420
  421 AKVSLFGGPN KDVLVIPQEA LIQTGKENRV IVKQTDDSFT AKAVTVGMMS QGKAEIISGL 480
  481 NEGERVVISG QFLLDSEASL KGSLMRLSSG HQH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle