YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIM19
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKPATDDA KDELLSPFRR LYALTRTPYP ALANAALLAS TPVLSPSFKV PPTQSPALSI  60
   61 PMSRVFSKSS TARIGITTKT ALFFSTMQAI GAYMIYDNDL ENGAGFIATW SALYLIVGGK 120
  121 KSFSALRYGR TWPLVLSSVS LANAVLYGQR FLATGFQ

Type	Start	End	Confidence
Cytoplasmic	1	74	0.88
Transmembrane Helix	75	95	0.84
Non-Cytoplasmic	96	102	0.79
Transmembrane Helix	103	119	0.90
Cytoplasmic	120	130	0.70
Transmembrane Helix	131	151	0.81
Non-Cytoplasmic	152	157	0.77