YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIH7_YEAST
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGKEEEQQY GQNGKGMENE LPFMKRPWFK KAYENAIEFH EKDELLDARD RLELSKAYRS  60
   61 IAKAEMWGGW LGFSAVFLTP FAYRYYKTKA IKGVKVPRNF VLGVMALFFA TNFAGRSMYT 120
  121 RQLNERDPTG VLKDNYSNKY GDNDFGAFQH DQTKEIPRNQ RQYNMMRLLD SGSPSRWSMY 180
  181 FYITYQNPER RLPDPKVKLQ QMKKGGVFNG SPFMNQRDPI GLYRNKGRKS PDPIEGEQND 240
  241 SPVLSSWEKI RNGDNSSSSS WENIRNTSRD QSQESDASVD HESDIFISGF SDDGNATDNS 300
  301 SSDDKYQRLL QSGRYGGNRS

Type	Start	End	Confidence
Non-Cytoplasmic	1	65	0.44
Transmembrane Helix	66	86	0.78
Cytoplasmic	87	95	0.45
Transmembrane Helix	96	119	0.75
Non-Cytoplasmic	120	320	0.55