YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190406282
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKVDFWPTL KDAYEPLYPQ QLEILRQQVV SEGGPTATIQ SRFNYAWGLI KSTDVNDERL  60
   61 GVKILTDIYK EAESRRRECL YYLTIGCYKL GEYSMAKRYV DTLFEHERNN KQVGALKSMV 120
  121 EDKIQKETLK GVVVAGGVLA GAVAVASFFL RNKRR

Type	Start	End	Confidence
Non-Cytoplasmic	1	128	0.54
Transmembrane Helix	129	150	0.87
Cytoplasmic	151	155	0.44