YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DFG10
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFDEEQLLK YTIYAYRLSF FVGICSLFIA KSCLPEFLQY GKTYRPKENS KYSSILERIK  60
   61 KFTVPKAYFS HFYYLATFLS LVTLYFYPKF PIVWIIFGHS LRRLYETLYV LHYTSNSRMN 120
  121 WSHYLVGIWF YSVLLLILNI SLYKNSIPNT LNMNAFIIFC IASWDQYKNH VILANLVKYS 180
  181 LPTGRLFRLV CCPHYLDEII IYSTLLPYEQ EFYLTLVWVI TSLTISALET KNYYRHKFKD 240
  241 NHVAPYAIIP FII

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.44
Transmembrane Helix	13	34	0.68
Cytoplasmic	35	67	0.65
Transmembrane Helix	68	88	0.84
Non-Cytoplasmic	89	120	0.63
Transmembrane Helix	121	143	0.88
Cytoplasmic	144	253	0.51