YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|112455672
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATSATSLF FPLPSSSLDP NXKTNNRVTS TNFAGLGPTP NSGGRMKVKP NAQAPPKING  60
   61 KKVGLPGSVE IETSQQQQPA PRTFINQLPD WSMLLAAITT VFLAAEKQWM MLDWKPRRSD 120
  121 MIMEPFGLGR IVQDGLVFRQ NFSIRSYEIG ADRSASIETV MNHLQETALN XVKTAGLLGD 180
  181 GFGSTPEMVK KXLIWVVTRM QVVVDTYPTW GDVVEVDTWV SKSGKNGMRR DWLVRDGNTG 240
  241 QILTRASSVW VMMNKLTRRL SKIPEEVRGE IEPYFVDFDP VLAEDSRKLT KLDDKTADYV 300
  301 RSGLTPRWSD LDVNQHVNNV KYIGWILESA PVGMMESQKL KSMTLEYRRE CGRDSVLQSL 360
  361 TAVSGCDIGN LGTAGEVECQ HLLRLQDGAE VVRGRTEWSS KTPTTTWDIT P

Type	Start	End	Confidence
Signal Peptide	1	18	0.80
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	411	0.96