YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|112434021
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYIGAHVSA SGGVANAAIR ASEIGATAFA LFTKNQRQWR ASPLTDEVIS EFKAACAKYG  60
   61 YGPEQILPHD SYLINLGHPV EEALEKSREA FIDELARCQQ LGLTLLNFHP GSHLMQIPVD 120
  121 ACLARIAESI NIALAQTEGV TAVIENTAGQ GSNLGFEFEH LAAIIDGVED KSRVGVCIDT 180
  181 CHAFAAGYDL RTEEACEKTF ADFERIVGFN YLRGMHLNDA KSAFGSRVDR HNSLGEGNIG 240
  241 HDAFRWIMRD SRFDGIPLIL ETTNPDIWAE EIAWLKAQQT EDAVA

Type	Start	End	Confidence
Signal Peptide	1	17	0.69
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	285	0.98