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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRM2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNVHIIKPL SLPQRFFSCI FHPLLLIFFT SVILTIWGSF SVIDITMAKM SHAQVKRNDT  60
   61 VSTFASISTA TATATTTATT TATMTAVTTQ HAIYSANSYS LNKTFIDNTI DQYFESKLRS 120
  121 IESTVGTDMQ EKFKSYTDDI LDNKQKLIND QISLETELIK EVLEVNNTIF NELLTKSQLI 180
  181 NDTWNEISED AMTIDKDSIS QMASNLLLNY SMFDSIFGNY SRKLKSLQNF NGTITDFSTQ 240
  241 LDTSSTLSLN FLRNSTDWLQ LKRNFTANLQ NEISILSGGS TEVTSSTSII KRSLKTNSEE 300
  301 NSVLSAVKNH VFRKCKRMTI IFTVMYFAFV ILLMAIERIL FQLENQQVNL VMSQINGLTG 360
  361 QTNFTKYNKV LKSLITTLNL STLYPIPYQL TKLINQKIFK REPEKIDDKK VKKSKLFYCN 420
  421 WWIISNGAHL WLFGFLMLLI HWQIVTRLTN FEVPSLPTFH KRAGPSLYKR EVWTDGNITT 480
  481 TIEGFINDSV SLLCENFQME VNEKFITANL SLQTDPNLKV QSTDILNLWV NDTNTQFEKY 540
  541 LNESSQNWQG IDLQVEPLLG SDSINEFLGQ YFLPTYEVTN TNSSFALDIQ KYGIINRGIN 600
  601 ITNASVAALS SLSKRQIKDK EQKQTYFLHT VYKWGLLAVC LTILFHHMLI FIILKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle