YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIL029C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIFIAKML QYSFLPFSPF NLLNFDNSIS VSWFITYSVI VSIWGFAVWI EGAYRNKINL  60
   61 QLPRCTKIKC SRYNTRIKSP KWFNCKNWMH FFLLYLFLTA SNLIVQLAYF SKEMCSQGIN 120
  121 VPGTKKPGNR VYLSVIILMG NG

Type	Start	End	Confidence
Cytoplasmic	1	8	0.51
Transmembrane Helix	9	23	0.42
Non-Cytoplasmic	24	28	0.61
Transmembrane Helix	29	50	0.85
Cytoplasmic	51	87	0.73
Transmembrane Helix	88	110	0.87
Non-Cytoplasmic	111	142	0.75