YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM44
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRSTFIRTS GTSSRTLTAR YRSQYTGLLV ARVLFSTSTT RAQGGNPRSP LQIFRDTFKK  60
   61 EWEKSQELQE NIKTLQDASG KLGESEAYKK AREAYLKAQR GSTIVGKTLK KTGETMEHIA 120
  121 TKAWESELGK NTRKAAAATA KKLDESFEPV RQTKIYKEVS EVIDDGESSR YGGFITKEQR 180
  181 RLKRERDLAS GKRHRAVKSN EDAGTAVVAT NIESKESFGK KVEDFKEKTV VGRSIQSLKN 240
  241 KLWDESENPL IVVMRKITNK VGGFFAETES SRVYSQFKLM DPTFSNESFT RHLREYIVPE 300
  301 ILEAYVKGDV KVLKKWFSEA PFNVYAAQQK IFKEQDVYAD GRILDIRGVE IVSAKLLAPQ 360
  361 DIPVLVVGCR AQEINLYRKK KTGEIAAGDE ANILMSSYAM VFTRDPEQID DDETEGWKIL 420
  421 EFVRGGSRQF T

Type	Start	End	Confidence
Signal Peptide	1	42	0.93
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	431	0.99