YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHR214W-A
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQVQSWFPV QKQPTLAVTF TPLPQLSHAH LPLPPSHLVT KTDAMFQHQL LPTQLQPFPP  60
   61 NHTPLLLLLT VTTMAVTPRL SLLNVLKKLQ QPPFLQNHTL LLPLLTVTTT AVTPRLSLPR 120
  121 LPNKHHWPLA QSPSLLLQLL ILLLPAPSLV LSFNPKVWLL V

Type	Start	End	Confidence
Non-Cytoplasmic	1	62	0.49
Transmembrane Helix	63	83	0.66
Cytoplasmic	84	93	0.55
Transmembrane Helix	94	118	0.67
Non-Cytoplasmic	119	133	0.51
Transmembrane Helix	134	155	0.83
Cytoplasmic	156	161	0.41