YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CTR2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDKKTWSTV TLRTFNQLVT SSLIGYSKKM DSMNHKMEGN AGHDHSDMHM GDGDDTCSMN  60
   61 MLFSWSYKNT CVVFEWWHIK TLPGLILSCL AIFGLAYLYE YLKYCVHKRQ LSQRVLLPNR 120
  121 SLTKINQADK VSNSILYGLQ VGFSFMLMLV FMTYNGWLML AVVCGAIWGN YSWCTSYSPE 180
  181 IDDSSLACH

Type	Start	End	Confidence
Cytoplasmic	1	75	0.65
Transmembrane Helix	76	99	0.76
Non-Cytoplasmic	100	142	0.55
Transmembrane Helix	143	169	0.76
Cytoplasmic	170	189	0.59