YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151944108
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSSVRFAF RRFWQSETGP KTVHFWAPTL KWGLVFAGFS DMKRPVEKIS GAQNLSLLST  60
   61 ALIWTRWSFV IKPRNILLAS VNSFLCLTAG YQLGRIANYR IRNGDSISQL CSYILSGADE 120
  121 SKKEITTGR

Type	Start	End	Confidence
Cytoplasmic	1	48	0.50
Transmembrane Helix	49	68	0.48
Non-Cytoplasmic	69	75	0.56
Transmembrane Helix	76	94	0.56
Cytoplasmic	95	129	0.49