YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EPT1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYFVPDSHI ENLKSYKYQS EDRSLVSKYF LKPFWQRFCH IFPTWMAPNI ITLSGFAFIV  60
   61 INVLTVFYYD PNLNTDTPRW TYFSYALGVF LYQTFDGCDG VHARRINQSG PLGELFDHSI 120
  121 DAINSTLSIF IFASETGMGF SYNLMLSQFA MLTNFYLSTW EEYHTHTLYL SEFSGPVEGI 180
  181 LIVCVSLILT GIYGKQVIWH TYLFTITVGD KVIDVDTLDI VFSLAVFGLV MNALSAKRNV 240
  241 DKYYRNSTSS ANNITQIEQD SAIKGLLPFF AYYASIALLV WMQPSFITLS FILSVGFTGA 300
  301 FTVGRIIVCH LTKQSFPMFN APMLIPLCQI VLYKICLSLW GIESNKIVFA LSWLGFGLSL 360
  361 GVHIMFMNDI IHEFTEYLDV YALSIKRSKL T

Type	Start	End	Confidence
Cytoplasmic	1	44	0.89
Transmembrane Helix	45	66	0.87
Non-Cytoplasmic	67	125	0.61
Transmembrane Helix	126	158	0.59
Cytoplasmic	159	172	0.58
Transmembrane Helix	173	194	0.83
Non-Cytoplasmic	195	216	0.57
Transmembrane Helix	217	236	0.65
Cytoplasmic	237	261	0.82
Transmembrane Helix	262	282	0.69
Non-Cytoplasmic	283	286	0.56
Transmembrane Helix	287	309	0.85
Cytoplasmic	310	317	0.63
Transmembrane Helix	318	341	0.73
Non-Cytoplasmic	342	346	0.52
Transmembrane Helix	347	367	0.91
Cytoplasmic	368	391	0.58