YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERP5
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.71
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYNIVHGIC LLFAITQAVG AVHFYAKSGE TKCFYEHLSR GNLLIGDLDL YVEKDGLFEE  60
   61 DPESSLTITV DETFDNDHRV LNQKNSHTGD VTFTALDTGE HRFCFTPFYS KKSATLRVFI 120
  121 ELEIGNVEAL DSKKKEDMNS LKGRVGQLTQ RLSSIRKEQD AIREKEAEFR NQSESANSKI 180
  181 MTWSVFQLLI LLGTCAFQLR YLKNFFVKQK VV

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	179	0.98
Transmembrane Helix	180	202	0.68
Cytoplasmic	203	212	0.72