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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CTM1
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVFRFYSN SRNIFIHKSL SLKPSTIDDP KSGYGLFVEP SKFKNDELKS ETIQLLRIPK  60
   61 RCTFNINTLL ALLGDEDEFS SKEEFQRTND KIKIALREIM AHPNFSVFLT ETNLLIIYFM 120
  121 IFQTIRSRYE IPENIQYYLE NVLMSIEVET AMDSIENLAT DYGHYPQIFG LRETLNLFKE 180
  181 LFHDVLNLSD IKHLYSAIIS RCLEIPERAD TKSEEFTVHS TLVPIVDFAN HEGTQKNAYF 240
  241 DIDPSNNDVL LLLDTKAVQS ELTKPIEVFI SYSPTEDLFS MLVTYGFTPD FRGNSQFWTV 300
  301 SFDRCFLRNY DGPDKTTNLR LFYKWMHINP VVPLVKYEHN GKTRWFLNDT TPEFDMLLLP 360
  361 FIPSIDDGKI ARWAYDSTCH LMFTKIHCLI NPEANEHALM IAENYRSLIK EKESNGDDFI 420
  421 NLPPLAWSLR YKDTENDCVR QRHICSEDAV AVLKQEEMQD STKTKSQFTS FFRKFLEFRR 480
  481 SKIIRPTSDS KVASILYQQE LEIIADLAKA IDSSSTIFFS DLNVTLDTEP ERLPPLRFLD 540
  541 DYIEISADKQ EPSPICEDLS YYTPSRFTDF FQEEVSQYAA FFQDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle