YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ECM34_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGRKSEDEK NEAALACDVF ESSNAKLPKN VFRSSFTWYC YEVINRSAFH IWLLLCLTLI  60
   61 VGWKVFSGIG GRRPSDSNMD GPQTKHKRNP GFLRRHSTIV ILVISLAVSF SWEAFKMYRE 120
  121 RTFGKQITQF AKEIIKSAPS TDMESWDRVA ADFNSYMYEN KLWNTEYFFC

Type	Start	End	Confidence
Cytoplasmic	1	47	0.60
Transmembrane Helix	48	70	0.84
Non-Cytoplasmic	71	91	0.59
Transmembrane Helix	92	115	0.80
Cytoplasmic	116	170	0.60