YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHL026C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHSRVDLIT LWAFPHTISG DCALSLFIQV GLTWASEEIL VGFDDYKRPV FRLNKWITKP  60
   61 SPLKTESNEE IPPPKKRFIV DYFESKDNVV AKQNTLYHKH NWLFGYLEVN RGIIPKGKEA 120
  121 TLKGFLTSQF IHDSTQSKFM NFIEWFVQKF IRSMILAIAM FIVIWPVTMG ILAGIGHKVG 180
  181 SHDYYFNDYP LPQVMKLIYA VVIAFVCTPV AIIVIVLRNQ FHEELYYEGL ANGTLQQDQE 240
  241 VCSTGNRSSG STDQDISTTK QQSQEAVA

Type	Start	End	Confidence
Cytoplasmic	1	153	0.90
Transmembrane Helix	154	176	0.91
Non-Cytoplasmic	177	196	0.89
Transmembrane Helix	197	217	0.96
Cytoplasmic	218	268	0.96