YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COS6
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKENELKNEK SVDVLSVKQL ESQKTVLPQD LFRSSFTWFC YEIYKSLVFR IWMLLWLPLS  60
   61 VWWKLSNNWI YPLMVSLLVL FWGPVFVLVI FRLSRKRSLS KQLTQFCKEI TKNTPSSDPH 120
  121 DWEVVAANLN SYFYENKAWN TKYFFFSAMS CQEAFRTTLL EPFSLKKDEA AKVKSFKDSV 180
  181 PYIEEALEVY FTEVEKQWKL FNSEKSWSPV GLEDAKLPKE AYRFKLTWVL KRIFNRRCLP 240
  241 LFLFYLHNVF ISRNDGTIAR PLFLVVLFFI MTRDFRNMRM IVLSVKMEHK MQFLSTIINE 300
  301 QESGANGWDE IAKKMNRYLF EKKVWKNEEF FFDGIDCEWF FSHFFYRVLS AKKSMRALSL 360
  361 NVELWPYIKE AQLSCSEESL A

Type	Start	End	Confidence
Cytoplasmic	1	45	0.92
Transmembrane Helix	46	63	0.87
Non-Cytoplasmic	64	69	0.79
Transmembrane Helix	70	91	0.93
Cytoplasmic	92	232	0.99
Transmembrane Helix	233	251	0.93
Non-Cytoplasmic	252	256	0.88
Transmembrane Helix	257	275	0.89
Cytoplasmic	276	381	0.96