YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FMP43
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASAFNFAF RRFWNSETGP KTVHFWAPTL KWGLVFAGLN DIKRPVEKVS GAQNLSLLAT  60
   61 ALIWTRWSFV IKPKNYLLAS VNFFLGCTAG YHLTRIANFR IRNGDSFKQV IHYIIKGETP 120
  121 AAVAAKQTAS TSMNKGVIGT NPPITH

Type	Start	End	Confidence
Cytoplasmic	1	50	0.58
Transmembrane Helix	51	68	0.50
Non-Cytoplasmic	69	75	0.63
Transmembrane Helix	76	94	0.71
Cytoplasmic	95	146	0.52