YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190406759
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDFYRQLD PVEEKIVPPE NAIVISSEAK EATVNEKEAK QGVLSQRVMK YIGENELVDG  60
   61 ISVRDPDYLK RFFNERRKQF SAKWDKVTNK IDDIAGRYYA REESFTSTIA SLHTDPNERL 120
  121 IPGLLSILVA SMTGSVLARR RTWLLRATMP IILGSCCFAY AMPTTFRNTM GLIHNLEMNT 180
  181 FPHFTERQDR VWKETKRLST ASVQYYYDAK KWLNKDVEKT GNAIKNWTGV NVK

Type	Start	End	Confidence
Cytoplasmic	1	141	0.74
Transmembrane Helix	142	163	0.84
Non-Cytoplasmic	164	233	0.81