YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DIE2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	35	0.90
Transmembrane Helix	36	57	0.89
Non-Cytoplasmic	58	94	0.84
Transmembrane Helix	95	112	0.75
Cytoplasmic	113	121	0.74
Transmembrane Helix	122	146	0.82
Non-Cytoplasmic	147	150	0.60
Transmembrane Helix	151	171	0.70
Cytoplasmic	172	175	0.50
Transmembrane Helix	176	201	0.72
Non-Cytoplasmic	202	202	0.39
Transmembrane Helix	203	228	0.66
Cytoplasmic	229	256	0.56
Transmembrane Helix	257	277	0.67
Non-Cytoplasmic	278	292	0.68
Transmembrane Helix	293	315	0.90
Cytoplasmic	316	375	0.56
Transmembrane Helix	376	394	0.66
Non-Cytoplasmic	395	423	0.68
Transmembrane Helix	424	444	0.80
Cytoplasmic	445	492	0.77
Transmembrane Helix	493	512	0.93
Non-Cytoplasmic	513	525	0.82

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAKKNTGEA NNDVLEEEAA IQLIAPGIAR NLTQEVITGI FCNVVIYPLL LIYFVLTFRY  60
   61 MTTNIVPYEF IDEKFHVGQT LTYLKGKWTQ WDPKITTPPG IYILGLINYY CIKPIFKSWS 120
  121 TLTILRLVNL LGGIIVFPIL VLRPIFLFNA LGFWPVSLMS FPLMTTYYYL FYTDVWSTIL 180
  181 ILQSLSCVLT LPFGPVKSIW LSAFFAGVSC LFRQTNIIWT GFIMILAVER PAILQKQFNT 240
  241 HTFNNYLKLF IHAIDDFSNL VLPYMKNFVL FFIYLIWNRS ITLGDKSSHS AGLHIVQIFY 300
  301 CFTFITVFSL PIWISRNFMK LYKLRIKRKP VQTFFEFIGI MLIIRYFTKV HPFLLADNRH 360
  361 YTFYLFRRLI GNKSRLIKYF FMTPIYHFST FAYLEVMRPN QLTFHPITPL PIKEPVHLPI 420
  421 QLTHVSWTAL ITCTMVTIVP SPLFEPRYYI LPYFFWRIFI TCSCEPLIKD LKPAKEGENP 480
  481 ITISSTKRLF MEFLWFMLFN VVTLVIFSKV SFPWTTEPYL QRIIW