YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190406810
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCAITPREA VIAKQRQYKH YLGMERPLWV RWLKVYAIGG AIIGSGFLLF KYTTPTDQQL  60
   61 ISQLSPELRL QYEREKKLRQ SEQQALMKIV KETSQSDDPI WKTGPLQSPW ERNGDNVQSR 120
  121 DHFAKVRAEE VQKEELARIR NELSQLRSET EEKTKEIVQD KQVKSWWRFW

Type	Start	End	Confidence
Cytoplasmic	1	31	0.93
Transmembrane Helix	32	53	0.91
Non-Cytoplasmic	54	170	0.96