YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190406851
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAADNLVR IINAVFLIIS IGLISGLIGT QTKHSSRVNF CMFAAVYGLV TDSLYGFLAN  60
   61 FWTSLTYPAI LLVLDFLNFI FTFVAATALA VGIRCHSCKN KTYLEQNKII QGSSSRCHQS 120
  121 QAAVAFFYFS CFLFLIKVTV ATMGMMQNGG FGSNTGFSRR RARRQMGIPT ISQV

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.89
Transmembrane Helix	8	30	0.90
Cytoplasmic	31	37	0.83
Transmembrane Helix	38	59	0.86
Non-Cytoplasmic	60	70	0.71
Transmembrane Helix	71	93	0.86
Cytoplasmic	94	123	0.86
Transmembrane Helix	124	145	0.87
Non-Cytoplasmic	146	174	0.88