YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YGR115C
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYISSILSD DRPVICVGCL MDCSLKSFFS WILLCLVSSS SSENSSSSMK SSNSSKIPPL  60
   61 SAVLFLFSWS SSSRPYSLFL PLRKPDSSSS SSSEKKSSNL DVESCLDAAT LSLSDSAAFP 120
  121 SSPTLFNLLN FPEEELALVR STPAFSINKS KSSSDSRSSS SLSLLLCFLL FLEILVPGSS 180
  181 FSSSSLTMKP SCTFLASSSS SSISSSSSEE SKTSSPSSSS LGALVSSLSF TISSSSLGTS 240
  241 FESPVSSIKG KFYVKILGN

Type	Start	End	Confidence
Cytoplasmic	1	158	0.61
Transmembrane Helix	159	181	0.77
Non-Cytoplasmic	182	259	0.64