YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YGR079W
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAANEGCV YLFIVVLRLS SFSCVNSFIH SFTRSRTRSS YSLDERSLVS YSIVYVAMNK  60
   61 SSKAFQVPNK VITKEDITPL SRSHTKKADT RGTADGKNTT ASAVEATPII ITTARSIDTA 120
  121 GSLSENATED DGTQNGDLHD DDDDDDLEST LGYSSEPDPL FSPCHQPSFT NSTFSYSADN 180
  181 ELPMEENHNK NNFHDSSESS IFLPQIQQSF FFGDNSKSDA NNTDFWKEVN GTAEEAICLQ 240
  241 ETRQRKCSLV ALHPGDATTS SNDTLGIEDF IKDDINSAEA MEPSPSSSPS SSLLDNLDYN 300
  301 IKLLCYRDNE GKFTLKKRKF LKNSLRSSSA ISKKWKPLSK RDKLLKRAIR RKSGVCQTLS 360
  361 AGFGIGEFML

Type	Start	End	Confidence
Cytoplasmic	1	8	0.64
Transmembrane Helix	9	30	0.69
Non-Cytoplasmic	31	370	0.93