YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YGR045C
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQITSKGRR ILDKKIRTFP VGFTSRKVAG HVLNISPYFL LAFSYAENKG QSAFEEIKGS  60
   61 NVIDMSCVIC FNFSCHLFVV IFISRSTETI PTTKLLLSKY IFYCVNALEL TLFLSYKSYS 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	26	0.65
Transmembrane Helix	27	41	0.51
Non-Cytoplasmic	42	61	0.65
Transmembrane Helix	62	84	0.72
Cytoplasmic	85	95	0.55
Transmembrane Helix	96	116	0.50
Non-Cytoplasmic	117	120	0.66