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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MSP1
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKFDLKTI TDLSVLVGTG ISLYYLVSRL LNDVESGPLS GKSRESKAKQ SLQWEKLVKR  60
   61 SPALAEVTLD AYERTILSSI VTPDEINITF QDIGGLDPLI SDLHESVIYP LMMPEVYSNS 120
  121 PLLQAPSGVL LYGPPGCGKT MLAKALAKES GANFISIRMS SIMDKWYGES NKIVDAMFSL 180
  181 ANKLQPCIIF IDEIDSFLRE RSSTDHEVTA TLKAEFMTLW DGLLNNGRVM IIGATNRIND 240
  241 IDDAFLRRLP KRFLVSLPGS DQRYKILSVL LKDTKLDEDE FDLQLIADNT KGFSGSDLKE 300
  301 LCREAALDAA KEYIKQKRQL IDSGTIDVND TSSLKIRPLK TKDFTKKLRM DATSTLSSQP 360
  361 LD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle